Journal of Animal and Veterinary Advances

Year: 2011
Volume: 10
Issue: 17
Page No. 2244 - 2247

Sequence Variation in Perforin-Like Protein 1 Gene among Six Toxoplasma gondii Strains

Authors : H.K. Yan, H.Q. Song, Y. Zhou, D. Ren, D.H. Zhou, M.J. Xu, R.Q. Lin, X.Q. Zhu and Z.G. Yuan

Abstract: Perforin-like Protein 1 (PLP1) plays an important role in the invasion process of T. gondii. In this study, we examined sequence variation in the PLP1 gene among six T. gondii strains from Guangzhou and Panyu in Guangdong, Suhe in Henan, Huzhu in Qinghai provinces of China, France and the USA, representing different genotypes. The PLP1 gene was amplified from the >6 strains by Polymerase Chain Reaction (PCR) and the amplicons were cloned and sequenced. The length of all of the PLP1 sequences was 3453 bp, consistent with that available in GenBank (EF 102772.2). In total, there were 42 (1.22%) variable nucleotide positions among the six PLP1 gene sequences and the 22 of which represented transversions. The A+T contents of the sequences was 48.3~48.9%. Intra-specific nucleotide variation was related mainly to changes at the 2nd and 3rd codon positions while fewer changes were detected at the 1st codon position. These results demonstrated that sequence variation in PLP1 gene among the six T. gondii strains was low and the PLP1 gene may not be an appropriate marker for the studies of genetic variation among T. gondii strains.

How to cite this article:

H.K. Yan, H.Q. Song, Y. Zhou, D. Ren, D.H. Zhou, M.J. Xu, R.Q. Lin, X.Q. Zhu and Z.G. Yuan, 2011. Sequence Variation in Perforin-Like Protein 1 Gene among Six Toxoplasma gondii Strains. Journal of Animal and Veterinary Advances, 10: 2244-2247.

INTRODUCTION

Toxoplasmosis is a parasitic disease caused by the intracellular protozoan parasite Toxoplasma gondii. It is one of the most epidemic parasitic diseases in human beings and warm-blooded animals. It is an opportunistic disease which is often lethal for patients with AIDS organ transplant recipients and those with neoplastic diseases such as birth defects, retinitis and brain damage if acutely infected via vertical transmission (Montoya and Liesenfeld, 2004). Furthermore, toxoplasmosis can result in serious economic losses to livestock industries (Buxton, 1998; Dubey et al., 2005; Zou et al., 2009).

Perforin (PF) and members of the Membrane Attack Complex (MAC) (complement proteins C6-C9) are pore-forming proteins of the innate and adaptive immune response that constitute the founding members of the MACPF domain family (Voskoboinik et al., 2006). Perforin-like Proteins (PLPs) are expressed by many bacterial and protozoan pathogens including T. gondii (Kaiser et al., 2004; Rosado et al., 2008). T. gondii Perforin-like Protein 1 (TgPLP1) deficient parasites failed to exit normally after intracellular growth, resulting in entrapment within host cells (Kafsack et al., 2009). Perforin-dependent killing of infected dendritic cells led to active egress of infectious parasites that rapidly infected adjacent effector NK cells (Persson et al., 2009).

Upon acting on infected cells via perforin-dependent pathways, T cells induce rapid egress of infectious parasites able to infect surrounding cells (Persson et al., 2007). All these data shows that PLPs play important roles in toxoplasmosis. However, sequence diversity in TgPLP1 gene is still unknown. Therefore, the objective of the present study was to examine sequence variation in TgPLP1 gene among six different T. gondii strains from different hosts and geographical locations which represents different T. gondii genotypes.

MATERIALS AND METHODS

Parasites, RNA extraction and RT-PCR: Tachyzoites of six T. gondii strains, namely RH, TgC7, PYS, TgPLh, Prugniaud (PRU) and QHO representing different genotypes (Zhou et al., 2009, 2010) were conserved in liquid nitrogen in the Laboratory of Parasitology, College of Veterinary Medicine, South China Agricultural University (Table 1). Tachyzoites were dissolved in 38°C water-bath and were used to infect Kunming mice intraperitoneally. Tachyzoites were harvested 72 h after infection from the peritoneal fluid of mice and stored at -80°C. Total RNA was isolated from the tachyzoites, column-purified (MagaZorb® Total RNA Mini-Prep kit, QIAGEN) and then eluted into 20 μL RNase-free water according to the manufacturer’s recommendations. RNA samples were stored at -70°C until use.

RT-PCR reactions (20 μL) were performed in 12 μL thermal denatured RNA (65°C for 5 min with 9 μL RNase-free H2O, 1 μL random primer, 2 μL total RNA), 4 μL 5xRT buffer, 2 μL dNTP mixture (10 mM), 1 μL RNase inhibitor (10 U μL-1) and 1 μL ReverTra Ace in a thermocycler (biometra) under the following conditions after an incubation at 30°C for 10 min then 42°C for 50 min; 99°C for 5 min and finally at 4°C for 5 min.

Enzymatic amplification: The PLP1 gene was amplified by Polymerase Chain Reaction (PCR) using a pair of primers (forward primer: 5'-ATGAGGTCACTCACAC ATGG (A/T/C)-3' and reverse primer: 5'-TTACAGGTCT AACAG CTTGACG(A/T/C)-3'). PCR reactions (25 μL) were performed in 3 mM of MgCl2, 0.5 μM of each primer, 2.5 μL LA-Buffer, 0.2 mM of each dNTPs, 1.25 U of LA Taq polymerase (TaKaRa) and 2 μL of cDNA sample in a thermocycler (biometra) under the following conditions after an initial denaturation at 94°C for 5 min then 94°C for 30 sec (denaturation); 62°C for 30 sec (annealing); 72°C for 30 sec (extension) for 32 cycles followed by a final extension at 72°C for 5 min.

Samples without T. gondii cDNA were included in each PCR run as negative controls. Also, host (mouse) control-DNA samples were subjected to the same amplification procedures as for parasite DNA. Each amplicon (5 μL) was examined on 1% agarose gels, stained with ethidium bromide and photographed using a gel documentation system (UVItec). The DL5000 marker (TaKaRa) was utilized to estimate the sizes of the PLP1 PCR products.

Purification, cloning, sequencing and analysis of PLP1 gene: Representative PCR products were purified using spin columns (Agarose Gel DNA Purification kit Ver. 2.0 TaKaRa) and the purified PCR products were ligated into the pGEM-T easy plasmid vector (Promega) according to manufacturer’s recommendations.

Table 1: Geographical origins, hosts of Toxoplasma gondii strains and the GenBank accession number of their Perforin-like Protein 1 (PLP1) genes
aZhou et al. (2009, 2010)

The recombinant plasmid was then transformed into JM109 competent cells (Promega) and positive transformants containing recombinant plasmids were selected by PCR amplification. Cell cultures with confirmed recombinant plasmid were sent to Shanghai Songon Biological Engineering, Biotechnology Company for sequencing.

Three colonies from each sample were sequenced from both directions. Sequences of the PLP1 gene were aligned using the computer program ClustalX 1.81 (Thompson et al., 1997), genetic distance calculation was performed using PUZZLE 4.1 (Strimmer and von Haeseler, 1996), sequence homology analysis was performed and the nucleotide composition, transition and transversion were counted using the Megalign program in the software DNA Star Version 5.0.

RESULTS AND DISCUSSION

The total RNA was prepared from six T. gondii strains from different hosts and geographical locations, representing different T. gondii genotypes (Table 1). As expected, a fragment of approximately 3450 bp in length was amplified from cDNA sample representing each T. gondii strain. On agarose gels, no size variation was detected among all of the amplicons and no products were amplified from the host or no-DNA control samples (Fig. 1). Representative PCR products were purified and cloned into pGEM-T easy plasmid vector. The positive recombinant plasmids were selected by bacterial PCR amplification and sequenced.

Six PLP1 sequences of 3453 bp were obtained. Sequence comparison among the six PLP1 sequences revealed 42 (1.22%) variable nucleotide positions of which 20 were transitions and 22 were transversions. The A+T contents of the sequences was 48.3~48.9% which was lower than that of C+G contents (51.1~51.7%). Intra-specific nucleotide variation in PLP1 sequences was related mainly to changes at the 2nd and 3rd codon positions while fewer changes being detected at the 1st codon position.

 

Fig. 1: Analysis of the PCR products of the Perforin-like Protein 1 (PLP1) gene among six Toxoplasma gondii strains by 1% agarose gel electrophoresis. Lanes 1-8 represent strains RH, TgC7, PYS, TgPLh, PRU, QHO, host (mouse) control and negative (no-DNA) control, respectively. M represents a DNA size marker (ordinate values in bp)

Table 2: Pairwise comparison of sequence percent identity (%) and divergence in the Perforin-like Protein 1 (PLP1) gene among six Toxoplasma gondii strains from China, France and USA

Although, only 42 (1.22%) nucleotides in PLP1 sequences were different among the six T. gondii strains (Table 2) indicating a low sequence divergence in T. gondii PLP1 gene, 13 nucleotides were different in the PLP1 sequences between the RH stain stored in the laboratory and the corresponding sequence of the RH strain available in GenBank (EF 102772.2) which may due to gene mutations induced by survival pressure in different experimental hosts.

CONCLUSION

The present study examined sequence variation in the PLP1 gene among six T. gondii strains from different hosts and geographical locations, representing different T. gondii genotypes. The results revealed a low sequence divergence in T. gondii PLP1 gene and the PLP1 gene may not be an appropriate marker for the studies of genetic variation and virulence among T. gondii strains.

ACKNOWLEDGEMENTS

This study was supported in part by grants from the National Natural Science Foundation of China (Grant No. 30901067), the State Key Laboratory of Veterinary Etiological Biology, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences (SKLVEB2009KFKT014 and SKLVEB2010KFKT010), the Natural Science Foundation of Guangdong Province (Grant No. 9451064201003715), the Scientific and Technological Planning Project of Guangdong Province (Grant No. 2010B020307006), the Specialized Research Fund for the Doctoral Program of Higher Education (Grant No. 20094404120016), the Program for Changjiang Scholars and Innovative Research Team in University (Grant No. IRT0723), the President’s Funds of South China Agricultural University (Grant No. 2009K034, 5500-209073 and 4100-K09320) and the Program for Science and Technology Innovation Activity of SCAU (2010).

Design and power by Medwell Web Development Team. © Medwell Publishing 2024 All Rights Reserved