Journal of Animal and Veterinary Advances
Year:
2011
Volume:
10
Issue:
22
Page No.
2968 - 2974
Identification and Association of the Single Nucleotide Polymorphisms in Calpastatin (CAST) Gene with Carcass Traits in Chicken
Authors :
Yao-Dong Hu,
Zeng-Rong Zhang
and
Qing Zhu
References
Barendse, W., 2002. DNA markers for meat tenderness. WO Patent WO/2002/064, pp: 820.
Bender, R. and S. Lange, 2001. Adjusting for multiple testing-when and how?. J. Clin Epidemiol., 54: 343-349.
PubMed | Bishop, M.D., M. Koohmaraie, J. Killefer and S. Kappes, 1993. Rapid communication: Restriction fragment length polymorphisms in the bovine calpastatin gene. J. Anim. Sci., 71: 2277-2277.
Direct Link | Boehm, M.L., T.L. Kendall, V.F. Thompson and D.E. Goll, 1998. Changes in the calpains and calpastatin during postmortem storage of bovine muscle. J. Anim. Sci., 76: 2415-2434.
Direct Link | Cao, Z.P., S.Z. Wang, Q.G. Wang, Y.X. Wang and H. Li, 2007. Association of Spot14alpha gene polymorphisms with body weight in the chicken. Poult. Sci., 86: 1873-1880.
PubMed | Casas, E., S.N. White, T.L. Wheeler, S.D. Shackelford and M. Koohmaraie
et al., 2006. Effects of calpastatin and micro-calpain markers in beef cattle on tenderness traits. J. Anim. Sci., 84: 520-525.
PubMed | Direct Link | Ciobanu, D.C., J.W.M. Bastiaansen, S.M. Lonergan, H. Thomsen, J.C.M. Dekkers, G.S. Plastow and M.F. Rothschild, 2004. New alleles in calpastatin gene are associated with meat quality traits in pigs. J. Anim. Sci., 82: 2829-2839.
PubMed | Direct Link | Daly, M.J., J.D. Rioux, S.F. Schaffner, T.J. Hudson and ES. Lander, 2001. High-resolution haplotype structure in the human genome. Nat. Genet., 29: 229-232.
CrossRef | Goll, D.E., V.F. Thompson, H. Li, W. Wei and J. Cong, 2003. The calpain system. Physiol. Rev., 83: 731-801.
PubMed | Huang, Q., Y.X. Fu and E. Boerwinkle, 2003. Comparison of strategies for selecting single nucleotide polymorphisms for case/control association studies. Hum. Genet., 113: 253-257.
Koohmaraie, M., 1992. The role of Ca(2+)-dependent proteases (calpains) in post mortem proteolysis and meat tenderness. Biochimie, 74: 239-245.
PubMed | Koohmaraie, M., M.P. Kent, S.D. Shackelford, E. Veiseth and T.L. Wheeler, 2002. Meat tenderness and muscle growth: Is there any relationship? Meat Sci., 62: 345-352.
CrossRef | Lee, W.C. and L.Y. Wang, 2008. Simple formulas for gauging the potential impacts of population stratification bias. Am. J. Epidemiol., 167: 86-89.
CrossRef | Lei, M., X. Peng, M. Zhou, C. Luo, Q. Nie and X. Zhang, 2009. Polymorphisms of the IGFLR gene and their genetic effects on chicken early growth and carcass traits. BMC Genet., 9: 1-9.
Liu, A., Y. Liu, X. Jiang, L. Li, H. Du and Q. Zhu, 2008. Studies of single nucleotide polymorphism of cast gene and its association with muscle fiber traits in chicken. Acta. Veterinaria. Zootechnica. Sinica, 39: 437-442.
Lonergan, S.M., C.W. Ernst, M.D. Bishop, C.R. Calkins and M. Koohmaraie, 1995. Relationship of Restriction Fragment Length Polymorphisms (RFLP) at the bovine calpastatin locus to calpastatin activity and meat tenderness. J. Anim. Sci., 73: 3608-3612.
PubMed | Parr, T., P.L. Sensky, R.G. Bardsley and P.J. Buttery, 2001. Calpastatin expression in porcine cardiac and skeletal muscle and partial gene structure. Arch. Biochem. Biophys., 395: 1-13.
CrossRef | Raynaud, P., C. Jayat-Vignoles, M.P. Laforet, H. Leveziel and V. Amarger, 2005. Four promoters direct expression of the calpastatin gene. Arch. Biochem. Biophys., 437: 69-77.
CrossRef | Schenkel, F.S., S.P. Miller, Z. Jiang, I.B. Mandell, X. Ye, H. Li and J.W. Wilton, 2006. Association of a single nucleotide polymorphism in the calpastatin gene with carcass and meat quality traits of beef cattle. J. Anim. Sci., 84: 291-299.
CrossRef | PubMed | Direct Link | Stephens, M., N.J. Smith and P. Donnelly, 2001. A new statistical method for haplotype reconstruction from population data. Am. J. Hum. Genet., 68: 978-989.
PubMed | Taylor, R.G., G.H. Geesink, V.F. Thompson, M. Koohmaraie and D.E. Goll, 1995. Is Z-disk degradation responsible for postmortem tenderization? J. Anim. Sci., 73: 1351-1367.
CrossRef | PubMed | Direct Link | Thomas, D.C. and J.S. Witte, 2002. Point: Population stratification: A problem for case-control studies of candidate-gene associations. Cancer Epidemiol. Biomarkers Prev., 11: 505-512.
Wendt, A., V.F. Thompson and D.E. Goll, 2004. Interaction of calpastatin with calpain: A review. Biol. Chem., 385: 465-472.
Zhang, W., A. Collins and N.E. Morton, 2004. Does haplotype diversity predict power for association mapping of disease susceptibility?. Hum. Genet., 115: 157-164.